STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163JH04Rab-GAP TBC domain-containing protein. (1039 aa)    
Predicted Functional Partners:
A0A168R3K6
Uncharacterized protein.
    
 0.618
A0A168T9T9
Uncharacterized protein.
    
 0.618
A0A163JPP4
Uncharacterized protein.
    
 0.617
A0A168LLY3
Uncharacterized protein.
    
 0.617
A0A163J1H2
Uncharacterized protein.
    
 0.595
A0A163KP78
Uncharacterized protein.
    
 0.595
A0A163KT52
Uncharacterized protein.
    
 0.595
A0A168Q9P6
Uncharacterized protein.
    
 0.595
A0A168RFH4
Uncharacterized protein.
    
 0.595
A0A168RG53
Uncharacterized protein.
    
 0.595
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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