A0A163LQQ7 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A163LQQ7

Uncharacterized protein. (397 aa)

Predicted Functional Partners:

A0A168P939

0.769

A0A163LPB4

0.700

A0A163THG0

0.653

A0A168MUX2

0.653

A0A168NE41

0.653

A0A168RR95

0.653

A0A168MFW6

0.637

A0A168R4U9

0.580

A0A163J1U9

0.570

A0A168KYL2

0.562

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163J1U9	A0A163LPB4	Uncharacterized protein.	TAF domain-containing protein.	0.999
A0A163J1U9	A0A163LQQ7	Uncharacterized protein.	Uncharacterized protein.	0.570
A0A163J1U9	A0A168KYL2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163J1U9	A0A168MFW6	Uncharacterized protein.	FAT domain-containing protein.	0.999
A0A163LPB4	A0A163J1U9	TAF domain-containing protein.	Uncharacterized protein.	0.999
A0A163LPB4	A0A163LQQ7	TAF domain-containing protein.	Uncharacterized protein.	0.700
A0A163LPB4	A0A168KYL2	TAF domain-containing protein.	Uncharacterized protein.	0.999
A0A163LPB4	A0A168MFW6	TAF domain-containing protein.	FAT domain-containing protein.	0.997
A0A163LQQ7	A0A163J1U9	Uncharacterized protein.	Uncharacterized protein.	0.570
A0A163LQQ7	A0A163LPB4	Uncharacterized protein.	TAF domain-containing protein.	0.700
A0A163LQQ7	A0A163THG0	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.653
A0A163LQQ7	A0A168KYL2	Uncharacterized protein.	Uncharacterized protein.	0.562
A0A163LQQ7	A0A168MFW6	Uncharacterized protein.	FAT domain-containing protein.	0.637
A0A163LQQ7	A0A168MUX2	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.653
A0A163LQQ7	A0A168NE41	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.653
A0A163LQQ7	A0A168P939	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A163LQQ7	A0A168R4U9	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A163LQQ7	A0A168RR95	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.653
A0A163THG0	A0A163LQQ7	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	Uncharacterized protein.	0.653
A0A163THG0	A0A168MFW6	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	FAT domain-containing protein.	0.980