STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A163LVW0Methyltransf_25 domain-containing protein. (319 aa)    
Predicted Functional Partners:
A0A168QLX8
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.721
A0A168T1L2
Uncharacterized protein.
   
 0.687
A0A168SH20
Uncharacterized protein.
   
  0.670
A0A168Q411
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.664
A0A163JQK3
Bms1-type G domain-containing protein.
   
  0.649
A0A168T5N4
Bms1-type G domain-containing protein.
   
  0.649
A0A163JLG9
Uncharacterized protein.
    
  0.636
A0A163J9J9
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 0.627
A0A163JJR7
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.627
A0A168L9F4
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.627
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.