A0A168L1J6 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168L1J6

Uncharacterized protein. (1483 aa)

Predicted Functional Partners:

A0A163KG33

0.897

A0A168LPX8

0.771

A0A168RE50

0.771

A0A163KBN8

0.728

A0A168QNW3

0.728

A0A168S7H3

0.728

A0A168R522

0.666

A0A163JYH1

0.606

A0A163MIT7

0.586

A0A163JB40

0.568

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163JB40	A0A163KBN8	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.921
A0A163JB40	A0A163KG33	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A163JB40	A0A168L1J6	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A163JB40	A0A168QNW3	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.921
A0A163JB40	A0A168R522	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.987
A0A163JB40	A0A168S7H3	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.921
A0A163JYH1	A0A163KG33	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A163JYH1	A0A168L1J6	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A163KBN8	A0A163JB40	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.921
A0A163KBN8	A0A163KG33	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.920
A0A163KBN8	A0A168L1J6	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.728
A0A163KBN8	A0A168R522	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Rab-GAP TBC domain-containing protein.	0.917
A0A163KG33	A0A163JB40	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A163KG33	A0A163JYH1	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A163KG33	A0A163KBN8	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.920
A0A163KG33	A0A163MIT7	Uncharacterized protein.	DH domain-containing protein.	0.659
A0A163KG33	A0A168L1J6	Uncharacterized protein.	Uncharacterized protein.	0.897
A0A163KG33	A0A168LPX8	Uncharacterized protein.	SH3 domain-containing protein.	0.467
A0A163KG33	A0A168QNW3	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.920
A0A163KG33	A0A168R522	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.998