STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168LC91Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
A0A168QHY6
Uncharacterized protein.
    
 0.807
A0A168QZA6
Uncharacterized protein.
    
 0.723
A0A168N5W3
PHD domain-containing protein.
    
 0.721
A0A163J1P5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.696
A0A163K6Z5
Nucleoporin_C domain-containing protein.
    
 0.694
A0A163J6Q2
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.681
A0A168LK36
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.681
A0A163K2X8
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.659
A0A168N5J0
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.617
A0A168NTR9
Nuclear cap-binding protein subunit 2.
    
  0.606
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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