A0A168LLY3 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168LLY3

Uncharacterized protein. (155 aa)

Predicted Functional Partners:

A0A168MB30

0.973

A0A163KP97

0.970

A0A168SEL2

0.970

A0A168T8T3

0.961

A0A163K3G9

0.955

A0A163JEA2

0.927

A0A168MJQ9

0.927

A0A168SY35

0.923

A0A168RJ13

0.895

A0A168SJQ7

0.891

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163JEA2	A0A163K3G9	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.705
A0A163JEA2	A0A163KP97	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.698
A0A163JEA2	A0A168LLY3	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.927
A0A163JEA2	A0A168MB30	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.696
A0A163JEA2	A0A168RJ13	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.421
A0A163JEA2	A0A168SEL2	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Zn(2)-C6 fungal-type domain-containing protein.	0.707
A0A163JEA2	A0A168T8T3	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.713
A0A163K3G9	A0A163JEA2	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.705
A0A163K3G9	A0A163KP97	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163K3G9	A0A168LLY3	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A163K3G9	A0A168MB30	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163K3G9	A0A168MJQ9	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.705
A0A163K3G9	A0A168RJ13	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A163K3G9	A0A168SEL2	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.999
A0A163K3G9	A0A168SJQ7	Uncharacterized protein.	Uso1_p115_head domain-containing protein.	0.472
A0A163K3G9	A0A168T8T3	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
A0A163KP97	A0A163JEA2	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.698
A0A163KP97	A0A163K3G9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A163KP97	A0A168LLY3	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A163KP97	A0A168MB30	Uncharacterized protein.	Uncharacterized protein.	0.999