Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A163J6C1 | A0A168NDA5 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Alpha-mann_mid domain-containing protein. | 0.485 |
A0A163JD75 | A0A168L8G8 | Autophagy-related protein. | N_BRCA1_IG domain-containing protein. | 0.971 |
A0A163JD75 | A0A168MST3 | Autophagy-related protein. | Uncharacterized protein. | 0.999 |
A0A163JD75 | A0A168MSW1 | Autophagy-related protein. | Uncharacterized protein. | 0.999 |
A0A163JD75 | A0A168NDA5 | Autophagy-related protein. | Alpha-mann_mid domain-containing protein. | 0.453 |
A0A163JD75 | A0A168PLG2 | Autophagy-related protein. | ZZ-type domain-containing protein. | 0.999 |
A0A163K921 | A0A168NDA5 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Alpha-mann_mid domain-containing protein. | 0.440 |
A0A163K921 | A0A168SAB6 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Uncharacterized protein. | 0.624 |
A0A163M160 | A0A168NDA5 | Glyco_hydro_85 domain-containing protein. | Alpha-mann_mid domain-containing protein. | 0.578 |
A0A168L8G8 | A0A163JD75 | N_BRCA1_IG domain-containing protein. | Autophagy-related protein. | 0.971 |
A0A168L8G8 | A0A168MST3 | N_BRCA1_IG domain-containing protein. | Uncharacterized protein. | 0.763 |
A0A168L8G8 | A0A168MSW1 | N_BRCA1_IG domain-containing protein. | Uncharacterized protein. | 0.763 |
A0A168L8G8 | A0A168NDA5 | N_BRCA1_IG domain-containing protein. | Alpha-mann_mid domain-containing protein. | 0.648 |
A0A168L8G8 | A0A168PLG2 | N_BRCA1_IG domain-containing protein. | ZZ-type domain-containing protein. | 0.763 |
A0A168MST3 | A0A163JD75 | Uncharacterized protein. | Autophagy-related protein. | 0.999 |
A0A168MST3 | A0A168L8G8 | Uncharacterized protein. | N_BRCA1_IG domain-containing protein. | 0.763 |
A0A168MST3 | A0A168MSW1 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
A0A168MST3 | A0A168NDA5 | Uncharacterized protein. | Alpha-mann_mid domain-containing protein. | 0.552 |
A0A168MST3 | A0A168PLG2 | Uncharacterized protein. | ZZ-type domain-containing protein. | 0.998 |
A0A168MSW1 | A0A163JD75 | Uncharacterized protein. | Autophagy-related protein. | 0.999 |
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