STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168NDA5Alpha-mann_mid domain-containing protein. (1066 aa)    
Predicted Functional Partners:
A0A168R6H0
Uncharacterized protein.
     
 0.807
A0A168L8G8
N_BRCA1_IG domain-containing protein.
   
 
 0.648
A0A163M160
Glyco_hydro_85 domain-containing protein.
  
  
 0.578
A0A168SAB6
Uncharacterized protein.
   
  
 0.561
A0A168MST3
Uncharacterized protein.
   
 
 0.552
A0A168MSW1
Uncharacterized protein.
   
 
 0.552
A0A168PLG2
ZZ-type domain-containing protein.
   
 
 0.552
A0A163J6C1
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
   0.485
A0A163JD75
Autophagy-related protein.
   
 
 0.453
A0A163K921
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.440
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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