STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168NVR2Homeobox domain-containing protein. (356 aa)    
Predicted Functional Partners:
A0A168NRT8
Homeobox domain-containing protein.
    
 
 0.609
A0A163MAK9
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.603
A0A163MGB0
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.603
A0A163MJS4
Hist_deacetyl domain-containing protein.
    
 0.603
A0A168S0W9
Homeobox_KN domain-containing protein.
  
  
0.572
A0A163K1T7
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.484
A0A168SCF9
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.484
A0A163J857
Homeobox domain-containing protein.
   
 0.464
A0A163JMK1
Homeobox domain-containing protein.
   
 0.464
A0A168LUK8
Homeobox domain-containing protein.
   
 0.464
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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