STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168P2D9Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (330 aa)    
Predicted Functional Partners:
A0A168R5U6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.908
A0A168PGX7
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.804
A0A163JD78
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.772
A0A163K3B9
S4 RNA-binding domain-containing protein.
  
 
 0.770
A0A163K6R8
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.770
A0A163JR81
Ribosomal_L30 domain-containing protein.
  
 
 0.769
A0A163TF52
Uncharacterized protein.
   
   0.769
A0A168N0F6
Uncharacterized protein.
  
 
 0.769
A0A168S3K5
Uncharacterized protein.
  
 
 0.769
A0A163JBC3
Ribosomal_L7Ae domain-containing protein.
   
   0.765
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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