A0A168QB92 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168QB92

Uncharacterized protein. (410 aa)

Predicted Functional Partners:

A0A168N3X5

0.891

A0A168SYW9

0.852

A0A168NWR6

0.842

A0A163K5L0

0.821

A0A168P6J2

0.821

A0A168NKR0

0.797

A0A163KB46

0.772

A0A163LSX0

0.772

A0A168QLA8

0.772

A0A163JQ36

0.725

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163JQ36	A0A163KB46	TM2 domain-containing protein.	Uncharacterized protein.	0.763
A0A163JQ36	A0A163LSX0	TM2 domain-containing protein.	Uncharacterized protein.	0.763
A0A163JQ36	A0A168N3X5	TM2 domain-containing protein.	Uncharacterized protein.	0.775
A0A163JQ36	A0A168NKR0	TM2 domain-containing protein.	Uncharacterized protein.	0.758
A0A163JQ36	A0A168NWR6	TM2 domain-containing protein.	Uncharacterized protein.	0.759
A0A163JQ36	A0A168P6J2	TM2 domain-containing protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.752
A0A163JQ36	A0A168QB92	TM2 domain-containing protein.	Uncharacterized protein.	0.725
A0A163JQ36	A0A168QLA8	TM2 domain-containing protein.	Uncharacterized protein.	0.763
A0A163JQ36	A0A168SYW9	TM2 domain-containing protein.	Uncharacterized protein.	0.760
A0A163K5L0	A0A163KB46	Uncharacterized protein.	Uncharacterized protein.	0.865
A0A163K5L0	A0A163LSX0	Uncharacterized protein.	Uncharacterized protein.	0.865
A0A163K5L0	A0A168N3X5	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A163K5L0	A0A168NKR0	Uncharacterized protein.	Uncharacterized protein.	0.849
A0A163K5L0	A0A168NWR6	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A163K5L0	A0A168P6J2	Uncharacterized protein.	Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.	0.954
A0A163K5L0	A0A168QB92	Uncharacterized protein.	Uncharacterized protein.	0.821
A0A163K5L0	A0A168QLA8	Uncharacterized protein.	Uncharacterized protein.	0.865
A0A163K5L0	A0A168SYW9	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A163KB46	A0A163JQ36	Uncharacterized protein.	TM2 domain-containing protein.	0.763
A0A163KB46	A0A163K5L0	Uncharacterized protein.	Uncharacterized protein.	0.865