STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A168R3N6FAR1 domain-containing protein. (234 aa)    
Predicted Functional Partners:
A0A168QPN9
SCA7 domain-containing protein.
    
 0.860
A0A163JQF6
Uncharacterized protein.
    
 0.856
A0A163K405
Uncharacterized protein.
    
 0.853
A0A163J1U9
Uncharacterized protein.
    
 0.852
A0A168MFW6
FAT domain-containing protein.
   
 0.848
A0A163LR41
Uncharacterized protein.
    
 0.846
A0A163LPB4
TAF domain-containing protein.
    
 0.843
A0A168T1J2
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.820
A0A163MB89
Uncharacterized protein.
    
 0.810
A0A163MAK9
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.787
Your Current Organism:
Absidia glauca
NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.