A0A168S9V6 protein (Absidia glauca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A168S9V6

Protein-serine/threonine kinase. (469 aa)

Predicted Functional Partners:

A0A168P836

0.810

A0A168MHA4

0.772

A0A168P6Q9

0.772

A0A168T0H3

0.772

A0A163JKH5

0.734

A0A168RBC2

0.734

A0A163LPL5

0.725

A0A168QGF8

0.725

A0A163KXB2

0.576

A0A168NM48

0.576

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163JKH5	A0A163KXB2	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Transket_pyr domain-containing protein.	0.676
A0A163JKH5	A0A163LPL5	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Dihydrolipoyl dehydrogenase.	0.995
A0A163JKH5	A0A168MHA4	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	2-oxoacid_dh domain-containing protein.	0.997
A0A163JKH5	A0A168NM48	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Transket_pyr domain-containing protein.	0.676
A0A163JKH5	A0A168P6Q9	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Uncharacterized protein.	0.991
A0A163JKH5	A0A168P836	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	E1_dh domain-containing protein.	0.999
A0A163JKH5	A0A168QGF8	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Dihydrolipoyl dehydrogenase.	0.995
A0A163JKH5	A0A168S9V6	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Protein-serine/threonine kinase.	0.734
A0A163JKH5	A0A168T0H3	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.996
A0A163KXB2	A0A163JKH5	Transket_pyr domain-containing protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.676
A0A163KXB2	A0A163LPL5	Transket_pyr domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.949
A0A163KXB2	A0A168MHA4	Transket_pyr domain-containing protein.	2-oxoacid_dh domain-containing protein.	0.936
A0A163KXB2	A0A168P6Q9	Transket_pyr domain-containing protein.	Uncharacterized protein.	0.933
A0A163KXB2	A0A168P836	Transket_pyr domain-containing protein.	E1_dh domain-containing protein.	0.991
A0A163KXB2	A0A168QGF8	Transket_pyr domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.949
A0A163KXB2	A0A168RBC2	Transket_pyr domain-containing protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.676
A0A163KXB2	A0A168S9V6	Transket_pyr domain-containing protein.	Protein-serine/threonine kinase.	0.576
A0A163KXB2	A0A168T0H3	Transket_pyr domain-containing protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.934
A0A163LPL5	A0A163JKH5	Dihydrolipoyl dehydrogenase.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.995
A0A163LPL5	A0A163KXB2	Dihydrolipoyl dehydrogenase.	Transket_pyr domain-containing protein.	0.949