STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsDArsenical resistance operon trans-acting repressor ArsD; Psort location: Cytoplasmic, score: 8.96. (108 aa)    
Predicted Functional Partners:
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.983
arsA
Arsenite-activated ATPase (arsA); KEGG: ctc:CTC01894 2.3e-196 arsenical pump-driving ATPase K01529; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.955
EEC52768.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bth:BT2836 1.6e-252 korA; 2-oxoglutarate synthase subunit korA K00174.
  
 
 0.866
cdr
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 1.2e-144 NADH dehydrogenase K00359; Psort location: Cytoplasmic, score: 9.97; Belongs to the sulfur carrier protein TusA family.
 
  
 0.807
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.740
mdh_2
Lactate/malate dehydrogenase, NAD binding domain protein; KEGG: bth:BT2510 1.8e-139 malate dehydrogenase K00026; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
  
 
 0.740
yccM
4Fe-4S binding domain protein; KEGG: eci:UTI89_C2483 7.7e-15 napG; ferredoxin-type protein, subunit of nitrate reductase, periplasmic K02573; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.737
arsB
KEGG: mtc:MT2720 1.6e-44 arsenical resistance protein/arsenate reductase K03741:K03325; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.727
EEC55546.1
Cytochrome C biogenesis protein transmembrane region; KEGG: rpa:RPA3812 1.8e-08 putative holocytochrome c synthase K06196; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.711
maeB
Phosphate acetyl/butyryl transferase; KEGG: bfr:BF3605 0. NADP-dependent malate dehydrogenase K00029; Psort location: Cytoplasmic, score: 8.96.
    
 0.707
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.