STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC54598.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (42 aa)    
Predicted Functional Partners:
nifJ
KEGG: bth:BT1747 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.837
EEC54596.1
Hypothetical protein.
       0.697
EEC54597.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.697
ydeA_1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.685
ydeA_2
DJ-1/PfpI family protein; KEGG: afu:AF1281 5.9e-05 pfpI; intracellular protease K05520.
  
 
 0.685
EEC54599.1
Hypothetical protein.
       0.668
EEC54595.1
Hypothetical protein.
    
  0.647
mutA
KEGG: bfs:BF3593 0. mutA, mcmA; putative methylmalonyl-CoA mutase small subunit K01847; Psort location: Cytoplasmic, score: 8.96.
    
 0.644
mutB
KEGG: bth:BT2090 0. methylmalonyl-CoA mutase large subunit K01848:K01849; Psort location: Cytoplasmic, score: 8.96.
    
 0.644
EEC54594.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.614
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.