STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppKEGG: bth:BT2791 6.1e-77 uracil phosphoribosyltransferase K00761; Psort location: Cytoplasmic, score: 8.96. (219 aa)    
Predicted Functional Partners:
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.950
udk
Uridine kinase; KEGG: bfs:BF3035 2.3e-100 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
  
 0.950
udk_2
Phosphoribulokinase/uridine kinase family protein; KEGG: bfs:BF4152 3.5e-161 putative phosphoribulose/uridine kinase K01868.
  
 0.950
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.948
rpiB
KEGG: bfr:BF1651 9.4e-65 ribose 5-phosphate isomerase B K01808.
 
  
 0.894
pyrF
KEGG: bth:BT4209 9.1e-138 orotidine 5'-phosphate decarboxylase K01591; Psort location: Cytoplasmic, score: 8.96; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.861
punA
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.841
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
  
  
 0.836
yfkN_2
KEGG: sil:SPO2904 2.9e-38 Ser/Thr protein phosphatase/nucleotidase, putative K01081.
  
  
 0.824
deoD
Phosphorylase family; KEGG: bfr:BF1175 1.5e-144 purine nucleoside phosphorylase II K00757; Psort location: Cytoplasmic, score: 8.96.
     
 0.817
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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