STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC58525.1ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 9.4e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 7.88. (226 aa)    
Predicted Functional Partners:
EEC58760.1
Putative ATP synthase F0, A subunit; KEGG: pen:PSEEN3042 0.00081 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.988
EEC57136.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 2.5e-48 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 0.982
EEC58562.1
KEGG: pen:PSEEN3042 3.8e-52 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 10.00.
 0.975
EEC58526.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 3.4e-05 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.971
EEC56116.1
Efflux ABC transporter, permease protein; KEGG: mpe:MYPE6470 8.2e-08 parC; DNA topoisomerase IV subunit A K02621; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.954
EEC58524.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01918 1.5e-27 resE; sensor protein ResE; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.784
EEC56484.1
KEGG: sma:SAV6546 1.1e-25 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.92.
 
 
 0.781
EEC57344.1
KEGG: hpa:HPAG1_1108 3.5e-26 glutamine ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.779
EEC58274.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
  0.745
EEC58275.1
Hypothetical protein.
  
  0.708
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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