STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgP-3Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (426 aa)    
Predicted Functional Partners:
glgP-2
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     0.992
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.962
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: tma:TM0239 1.9e-80 glucose-1-phosphate adenylyltransferase K00975; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.957
malQ
4-alpha-glucanotransferase; KEGG: cpe:CPE2338 2.4e-130 malQ; 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
 
 0.953
EEC57864.1
Putative glycogen debranching enzyme GlgX; KEGG: syn:slr1857 1.1e-88 glgX; glycogen operon protein GlgX K02438.
 
 
 0.951
glgB
KEGG: nmu:Nmul_A0717 1.2e-98 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 13 family.
  
 0.892
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.892
EEC56430.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: cpr:CPR_1841 1.0e-161 phosphomannomutase K01840.
  
 
 0.818
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.812
EEC57860.1
Hypothetical protein; KEGG: mpe:MYPE6470 8.6e-05 parC; DNA topoisomerase IV subunit A K02621; Psort location: Cytoplasmic, score: 8.96.
       0.773
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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