STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC57223.1Hypothetical protein; KEGG: mpe:MYPE6470 0.00018 parC; DNA topoisomerase IV subunit A K02621; Psort location: OuterMembrane, score: 9.49. (506 aa)    
Predicted Functional Partners:
EEC57224.1
Helicase C-terminal domain protein; KEGG: cal:orf19.607 9.0e-07 RAD26; DNA dependent ATPase involved in DNA repair K01509.
     0.989
EEC57225.1
Toprim domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.938
EEC57278.1
Helicase C-terminal domain protein; KEGG: mbo:Mb2127 0.0038 helZ; probable helicase HelZ.
 
     0.932
EEC57226.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.931
EEC58687.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.919
EEC56069.1
N-6 DNA Methylase; KEGG: chu:CHU_1468 2.6e-08 dpn; possible adenine-specific DNA methylase K00599.
 
     0.904
EEC57222.1
Hypothetical protein; KEGG: tcr:508881.70 0.0041 DNA ligase K01971.
 
     0.887
EEC57229.1
Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.879
EEC57228.1
Hypothetical protein; KEGG: ppr:PBPRA3149 0.0050 putative oxygen-independent coproporphyrinogen III oxidase K02495.
 
     0.876
EEC57277.1
Hypothetical protein; KEGG: ecj:JW0058 0.00084 hepA; RNA polymerase-associated helicase protein K03580; Psort location: Cytoplasmic, score: 8.96.
     0.862
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.