STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC57509.1ABC transporter, ATP-binding protein; KEGG: ava:Ava_1188 4.1e-44 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters K06147; Psort location: CytoplasmicMembrane, score: 9.82. (303 aa)    
Predicted Functional Partners:
EEC56485.1
ABC transporter, ATP-binding protein; KEGG: stl:stu0606 7.7e-86 polar amino acid ABC uptake transporter ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.865
EEC57345.1
KEGG: efa:EF0246 8.9e-76 amino acid ABC transporter, ATP-binding protein K02028; Psort location: Cytoplasmic, score: 9.12.
 
     
0.841
EEC57508.1
Hypothetical protein; KEGG: reh:H16_A0776 5.4e-06 ABC-type transporter, ATPase and permease components: Prot2E family.
     0.800
EEC57506.1
KEGG: reh:H16_A0776 8.3e-57 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.777
EEC57507.1
Hypothetical protein.
       0.773
EEC57510.1
Hypothetical protein.
       0.773
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
   0.690
EEC57505.1
Hypothetical protein.
       0.640
EEC58761.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 5.6e-51 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
    
0.583
dnaJ
Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...]
  
 
   0.547
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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