STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC57641.1Ppx/GppA phosphatase family protein; KEGG: lpl:lp_0843 3.9e-66 ppx3; exopolyphosphatase K01514; Psort location: Cytoplasmic, score: 8.96. (500 aa)    
Predicted Functional Partners:
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.977
ppk1-2
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.951
EEC57817.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.855
EEC56280.1
Hypothetical protein; KEGG: nph:NP3860A 2.6e-14 relA; probable GTP pyrophosphokinase K00951; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.825
EEC57640.1
KEGG: mmr:Mmar10_1341 1.8e-52 prephenate dehydratase K01713; Psort location: Cytoplasmic, score: 9.97.
       0.791
pap
polyphosphate:AMP phosphotransferase; KEGG: ret:RHE_PC00203 1.8e-38 hypothetical protein K00937; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.633
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.630
EEC55838.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.590
EEC56545.1
DRTGG domain protein; KEGG: ctc:CTC01649 3.6e-120 putative manganese-dependent inorganic pyrophosphatase K01507.
    
  0.539
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
    0.536
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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