STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC56388.1Hypothetical protein; KEGG: tde:TDE0756 1.0e-28 iron compound ABC transporter, ATP-binding protein, putative K02013; Psort location: Cytoplasmic, score: 9.12. (152 aa)    
Predicted Functional Partners:
EEC56389.1
Hypothetical protein; KEGG: fnu:FN0882 9.6e-24 hmuV; hemin transport system ATP-binding protein hmuV K02013; Psort location: Cytoplasmic, score: 9.12.
     0.993
EEC56386.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.991
EEC56390.1
Periplasmic binding protein.
 
 0.970
EEC55992.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.962
EEC58219.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.960
EEC56921.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.954
EEC55991.1
Periplasmic binding protein.
 
 0.882
EEC56920.1
Periplasmic binding protein.
  
 0.835
EEC56391.1
Hypothetical protein; KEGG: pfu:PF1108 0.00014 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.638
EEC56387.1
Hypothetical protein.
       0.572
Your Current Organism:
Bacteroides pectinophilus
NCBI taxonomy Id: 483218
Other names: Bacteroides pectinophilus ATCC 43243, [. pectinophilus ATCC 43243, [Bacteroides] pectinophilus ATCC 43243, [Bacteroides] pectinophilus str. ATCC 43243, [Bacteroides] pectinophilus strain ATCC 43243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.