Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI62098.1 | AEI62852.1 | LILAB_00830 | LILAB_04655 | Hypothetical protein. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.493 |
AEI62098.1 | AEI68601.1 | LILAB_00830 | LILAB_33600 | Hypothetical protein. | COG3186 Phenylalanine-4-hydroxylase. | 0.621 |
AEI62852.1 | AEI62098.1 | LILAB_04655 | LILAB_00830 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | Hypothetical protein. | 0.493 |
AEI62852.1 | AEI62853.1 | LILAB_04655 | LILAB_04660 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.633 |
AEI62852.1 | AEI66229.1 | LILAB_04655 | LILAB_21645 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | Protease B; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.417 |
AEI62852.1 | AEI68601.1 | LILAB_04655 | LILAB_33600 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | COG3186 Phenylalanine-4-hydroxylase. | 0.492 |
AEI62852.1 | AEI68698.1 | LILAB_04655 | LILAB_34085 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | M27 family peptidase. | 0.412 |
AEI62853.1 | AEI62852.1 | LILAB_04660 | LILAB_04655 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.633 |
AEI66229.1 | AEI62852.1 | LILAB_21645 | LILAB_04655 | Protease B; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.417 |
AEI68601.1 | AEI62098.1 | LILAB_33600 | LILAB_00830 | COG3186 Phenylalanine-4-hydroxylase. | Hypothetical protein. | 0.621 |
AEI68601.1 | AEI62852.1 | LILAB_33600 | LILAB_04655 | COG3186 Phenylalanine-4-hydroxylase. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.492 |
AEI68698.1 | AEI62852.1 | LILAB_34085 | LILAB_04655 | M27 family peptidase. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.412 |