STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI67494.1NfeD family protein; COG1585 Membrane protein implicated in regulation of membrane protease activity. (160 aa)    
Predicted Functional Partners:
AEI67495.1
SPFH domain-containing protein/band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.957
AEI67058.1
COG2268 Uncharacterized protein conserved in bacteria.
  
  
 0.706
AEI68462.1
SPFH domain-containing protein/band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
  
 0.706
AEI62903.1
SPFH domain-containing protein/band 7 family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.674
AEI62902.1
COG1030 Membrane-bound serine protease (ClpP class).
  
  
 0.648
AEI67743.1
COG3296 Uncharacterized protein conserved in bacteria.
   
  
 0.575
AEI68864.1
Putative helicase; COG3973 Superfamily I DNA and RNA helicases.
   
    0.540
AEI66627.1
HflK protein; HflC and HflK could encode or regulate a protease.
 
  
 0.536
AEI65991.1
Putative phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
   
    0.499
AEI67493.1
Hypothetical protein.
       0.494
Your Current Organism:
Myxococcus fulvus HW1
NCBI taxonomy Id: 483219
Other names: M. fulvus HW-1, Myxococcus fulvus HW-1, Myxococcus fulvus str. HW-1, Myxococcus fulvus strain HW-1
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