STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI67608.1TPR repeat-containing protein. (169 aa)    
Predicted Functional Partners:
AEI64465.1
Sensor histidine kinase/response regulator; COG2770 FOG: HAMP domain.
   
 0.902
AEI62965.1
Hybrid signal transduction histidine kinase J; COG2770 FOG: HAMP domain.
   
 0.677
AEI67609.1
Hypothetical protein.
       0.626
AEI65758.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
   
 0.583
AEI66441.1
HAMP domain/GAF domain/GGDEF domain-containing protein; COG2199 FOG: GGDEF domain.
    
 0.496
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.445
AEI62286.1
HSP90 family protein; COG0326 Molecular chaperone, HSP90 family.
   
 0.434
AEI62946.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
   
 0.434
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.434
AEI64637.1
FHA/GAF domain-containing protein; COG1716 FOG: FHA domain.
  
 0.426
Your Current Organism:
Myxococcus fulvus HW1
NCBI taxonomy Id: 483219
Other names: M. fulvus HW-1, Myxococcus fulvus HW-1, Myxococcus fulvus str. HW-1, Myxococcus fulvus strain HW-1
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