Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001660385_03244 | NI17_00340 | GCA_001660385_03244 | GCA_001660385_02246 | Unannotated protein. | Unannotated protein. | 0.687 |
GCA_001660385_03244 | NI17_11800 | GCA_001660385_03244 | GCA_001660385_00714 | Unannotated protein. | Unannotated protein. | 0.933 |
GCA_001660385_03244 | NI17_15690 | GCA_001660385_03244 | GCA_001660385_00191 | Unannotated protein. | Unannotated protein. | 0.741 |
GCA_001660385_03244 | NI17_17560 | GCA_001660385_03244 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.986 |
GCA_001660385_03244 | NI17_21410 | GCA_001660385_03244 | GCA_001660385_01964 | Unannotated protein. | Unannotated protein. | 0.977 |
GCA_001660385_03244 | dapF | GCA_001660385_03244 | GCA_001660385_00539 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.481 |
GCA_001660385_03244 | nadE | GCA_001660385_03244 | GCA_001660385_01299 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.944 |
GCA_001660385_03244 | ribBA | GCA_001660385_03244 | GCA_001660385_03860 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.563 |
NI17_00340 | GCA_001660385_03244 | GCA_001660385_02246 | GCA_001660385_03244 | Unannotated protein. | Unannotated protein. | 0.687 |
NI17_00340 | NI17_15690 | GCA_001660385_02246 | GCA_001660385_00191 | Unannotated protein. | Unannotated protein. | 0.987 |
NI17_00340 | NI17_17560 | GCA_001660385_02246 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.500 |
NI17_00340 | NI17_21410 | GCA_001660385_02246 | GCA_001660385_01964 | Unannotated protein. | Unannotated protein. | 0.989 |
NI17_00340 | nadE | GCA_001660385_02246 | GCA_001660385_01299 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.698 |
NI17_11800 | GCA_001660385_03244 | GCA_001660385_00714 | GCA_001660385_03244 | Unannotated protein. | Unannotated protein. | 0.933 |
NI17_11800 | NI17_15690 | GCA_001660385_00714 | GCA_001660385_00191 | Unannotated protein. | Unannotated protein. | 0.766 |
NI17_11800 | NI17_17560 | GCA_001660385_00714 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.972 |
NI17_11800 | dapF | GCA_001660385_00714 | GCA_001660385_00539 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.568 |
NI17_11800 | nadE | GCA_001660385_00714 | GCA_001660385_01299 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.836 |
NI17_11800 | ribBA | GCA_001660385_00714 | GCA_001660385_03860 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.949 |
NI17_15690 | GCA_001660385_03244 | GCA_001660385_00191 | GCA_001660385_03244 | Unannotated protein. | Unannotated protein. | 0.741 |
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