Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NI17_14005 | NI17_14010 | GCA_001660385_00511 | GCA_001660385_00512 | Unannotated protein. | Unannotated protein. | 0.528 |
NI17_14010 | NI17_14005 | GCA_001660385_00512 | GCA_001660385_00511 | Unannotated protein. | Unannotated protein. | 0.528 |
NI17_14010 | NI17_14340 | GCA_001660385_00512 | GCA_001660385_02278 | Unannotated protein. | Unannotated protein. | 0.773 |
NI17_14010 | NI17_14345 | GCA_001660385_00512 | GCA_001660385_02277 | Unannotated protein. | Unannotated protein. | 0.758 |
NI17_14010 | NI17_16770 | GCA_001660385_00512 | GCA_001660385_01878 | Unannotated protein. | Unannotated protein. | 0.758 |
NI17_14010 | dapA | GCA_001660385_00512 | GCA_001660385_00513 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.466 |
NI17_14010 | rnj | GCA_001660385_00512 | GCA_001660385_00514 | Unannotated protein. | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.503 |
NI17_14340 | NI17_14010 | GCA_001660385_02278 | GCA_001660385_00512 | Unannotated protein. | Unannotated protein. | 0.773 |
NI17_14340 | NI17_14345 | GCA_001660385_02278 | GCA_001660385_02277 | Unannotated protein. | Unannotated protein. | 0.857 |
NI17_14340 | NI17_16770 | GCA_001660385_02278 | GCA_001660385_01878 | Unannotated protein. | Unannotated protein. | 0.685 |
NI17_14345 | NI17_14010 | GCA_001660385_02277 | GCA_001660385_00512 | Unannotated protein. | Unannotated protein. | 0.758 |
NI17_14345 | NI17_14340 | GCA_001660385_02277 | GCA_001660385_02278 | Unannotated protein. | Unannotated protein. | 0.857 |
NI17_16770 | NI17_14010 | GCA_001660385_01878 | GCA_001660385_00512 | Unannotated protein. | Unannotated protein. | 0.758 |
NI17_16770 | NI17_14340 | GCA_001660385_01878 | GCA_001660385_02278 | Unannotated protein. | Unannotated protein. | 0.685 |
dapA | NI17_14010 | GCA_001660385_00513 | GCA_001660385_00512 | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Unannotated protein. | 0.466 |
dapA | rnj | GCA_001660385_00513 | GCA_001660385_00514 | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.818 |
rnj | NI17_14010 | GCA_001660385_00514 | GCA_001660385_00512 | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Unannotated protein. | 0.503 |
rnj | dapA | GCA_001660385_00514 | GCA_001660385_00513 | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.818 |