STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NI17_09355Unannotated protein. (297 aa)    
Predicted Functional Partners:
NI17_09360
Unannotated protein.
 
 0.999
NI17_04925
Unannotated protein.
 
 0.996
NI17_22330
Unannotated protein.
 
 
 0.991
NI17_04930
Unannotated protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.977
NI17_09350
Unannotated protein; Belongs to the Fur family.
 
  
 0.920
NI17_09365
Unannotated protein.
       0.738
NI17_04935
Unannotated protein.
  
 
 0.547
NI17_09370
Unannotated protein.
       0.543
NI17_04920
Unannotated protein.
  
  
 
0.521
NI17_17320
Unannotated protein.
  
 
 0.466
Your Current Organism:
Thermobifida halotolerans
NCBI taxonomy Id: 483545
Other names: DSM 44931, JCM 16012, KCTC 19123, T. halotolerans, Thermobifida halotolerans Yang et al. 2008, YIM 90462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.