Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NI17_11800 | NI17_13910 | GCA_001660385_00714 | GCA_001660385_00954 | Unannotated protein. | Unannotated protein. | 0.723 |
NI17_11800 | NI17_17560 | GCA_001660385_00714 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.972 |
NI17_11800 | polA | GCA_001660385_00714 | GCA_001660385_03735 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.462 |
NI17_11800 | ribBA | GCA_001660385_00714 | GCA_001660385_03860 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.949 |
NI17_13910 | NI17_11800 | GCA_001660385_00954 | GCA_001660385_00714 | Unannotated protein. | Unannotated protein. | 0.723 |
NI17_13910 | NI17_13915 | GCA_001660385_00954 | GCA_001660385_00953 | Unannotated protein. | Unannotated protein. | 0.678 |
NI17_13910 | NI17_17560 | GCA_001660385_00954 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.791 |
NI17_13910 | polA | GCA_001660385_00954 | GCA_001660385_03735 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.685 |
NI17_13910 | prfB | GCA_001660385_00954 | GCA_001660385_00955 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.557 |
NI17_13910 | ribBA | GCA_001660385_00954 | GCA_001660385_03860 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.717 |
NI17_13915 | NI17_13910 | GCA_001660385_00953 | GCA_001660385_00954 | Unannotated protein. | Unannotated protein. | 0.678 |
NI17_13915 | prfB | GCA_001660385_00953 | GCA_001660385_00955 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.490 |
NI17_17560 | NI17_11800 | GCA_001660385_04207 | GCA_001660385_00714 | Unannotated protein. | Unannotated protein. | 0.972 |
NI17_17560 | NI17_13910 | GCA_001660385_04207 | GCA_001660385_00954 | Unannotated protein. | Unannotated protein. | 0.791 |
NI17_17560 | polA | GCA_001660385_04207 | GCA_001660385_03735 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.708 |
NI17_17560 | prfB | GCA_001660385_04207 | GCA_001660385_00955 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.492 |
NI17_17560 | ribBA | GCA_001660385_04207 | GCA_001660385_03860 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.952 |
polA | NI17_11800 | GCA_001660385_03735 | GCA_001660385_00714 | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Unannotated protein. | 0.462 |
polA | NI17_13910 | GCA_001660385_03735 | GCA_001660385_00954 | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Unannotated protein. | 0.685 |
polA | NI17_17560 | GCA_001660385_03735 | GCA_001660385_04207 | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Unannotated protein. | 0.708 |
page 1 of 2