STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NI17_05705Unannotated protein. (339 aa)    
Predicted Functional Partners:
NI17_20955
Unannotated protein.
 
  
  0.750
xyn11A
Unannotated protein; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.716
NI17_11315
Unannotated protein.
 
  
  0.712
NI17_10745
Unannotated protein.
  
     0.669
NI17_10815
Unannotated protein.
  
     0.636
NI17_07080
Unannotated protein.
  
     0.633
NI17_13010
Unannotated protein.
  
     0.622
NI17_18630
Unannotated protein.
  
     0.594
GCA_001660385_01169
Unannotated protein.
 
  
  0.589
NI17_04940
Unannotated protein.
  
     0.575
Your Current Organism:
Thermobifida halotolerans
NCBI taxonomy Id: 483545
Other names: DSM 44931, JCM 16012, KCTC 19123, T. halotolerans, Thermobifida halotolerans Yang et al. 2008, YIM 90462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.