Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001660385_03664 | NI17_01050 | GCA_001660385_03664 | GCA_001660385_03666 | Unannotated protein. | Unannotated protein. | 0.985 |
GCA_001660385_03664 | NI17_03085 | GCA_001660385_03664 | GCA_001660385_01660 | Unannotated protein. | Unannotated protein. | 0.604 |
GCA_001660385_03664 | NI17_03460 | GCA_001660385_03664 | GCA_001660385_04551 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.714 |
GCA_001660385_03664 | NI17_12075 | GCA_001660385_03664 | GCA_001660385_03753 | Unannotated protein. | Unannotated protein. | 0.842 |
GCA_001660385_03664 | NI17_14655 | GCA_001660385_03664 | GCA_001660385_03901 | Unannotated protein. | Unannotated protein. | 0.443 |
GCA_001660385_03664 | gcvP | GCA_001660385_03664 | GCA_001660385_01713 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.771 |
GCA_001660385_03664 | gcvT | GCA_001660385_03664 | GCA_001660385_02807 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.963 |
GCA_001660385_03664 | thiG | GCA_001660385_03664 | GCA_001660385_03902 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.524 |
NI17_01050 | GCA_001660385_03664 | GCA_001660385_03666 | GCA_001660385_03664 | Unannotated protein. | Unannotated protein. | 0.985 |
NI17_01050 | NI17_03085 | GCA_001660385_03666 | GCA_001660385_01660 | Unannotated protein. | Unannotated protein. | 0.553 |
NI17_01050 | NI17_12075 | GCA_001660385_03666 | GCA_001660385_03753 | Unannotated protein. | Unannotated protein. | 0.898 |
NI17_01050 | gcvP | GCA_001660385_03666 | GCA_001660385_01713 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.756 |
NI17_02915 | NI17_03085 | GCA_001660385_01981 | GCA_001660385_01660 | Unannotated protein. | Unannotated protein. | 0.889 |
NI17_02915 | NI17_03460 | GCA_001660385_01981 | GCA_001660385_04551 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.714 |
NI17_02915 | NI17_12075 | GCA_001660385_01981 | GCA_001660385_03753 | Unannotated protein. | Unannotated protein. | 0.842 |
NI17_02915 | NI17_14655 | GCA_001660385_01981 | GCA_001660385_03901 | Unannotated protein. | Unannotated protein. | 0.443 |
NI17_02915 | gcvP | GCA_001660385_01981 | GCA_001660385_01713 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.728 |
NI17_02915 | gcvT | GCA_001660385_01981 | GCA_001660385_02807 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.873 |
NI17_02915 | thiG | GCA_001660385_01981 | GCA_001660385_03902 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.457 |
NI17_03080 | NI17_03085 | GCA_001660385_01659 | GCA_001660385_01660 | Unannotated protein. | Unannotated protein. | 0.593 |
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