Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NI17_00340 | NI17_16840 | GCA_001660385_02246 | GCA_001660385_01864 | Unannotated protein. | Unannotated protein. | 0.408 |
NI17_00340 | NI17_17560 | GCA_001660385_02246 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.500 |
NI17_16840 | NI17_00340 | GCA_001660385_01864 | GCA_001660385_02246 | Unannotated protein. | Unannotated protein. | 0.408 |
NI17_16840 | NI17_16845 | GCA_001660385_01864 | GCA_001660385_01863 | Unannotated protein. | Unannotated protein. | 0.996 |
NI17_16840 | NI17_16850 | GCA_001660385_01864 | GCA_001660385_01862 | Unannotated protein. | Unannotated protein. | 0.910 |
NI17_16840 | NI17_16855 | GCA_001660385_01864 | GCA_001660385_01861 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.947 |
NI17_16840 | NI17_16860 | GCA_001660385_01864 | GCA_001660385_01860 | Unannotated protein. | Unannotated protein. | 0.650 |
NI17_16840 | NI17_16865 | GCA_001660385_01864 | GCA_001660385_01859 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.660 |
NI17_16840 | NI17_17560 | GCA_001660385_01864 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.475 |
NI17_16840 | acsA | GCA_001660385_01864 | GCA_001660385_01865 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.501 |
NI17_16845 | NI17_16840 | GCA_001660385_01863 | GCA_001660385_01864 | Unannotated protein. | Unannotated protein. | 0.996 |
NI17_16845 | NI17_16850 | GCA_001660385_01863 | GCA_001660385_01862 | Unannotated protein. | Unannotated protein. | 0.924 |
NI17_16845 | NI17_16855 | GCA_001660385_01863 | GCA_001660385_01861 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.945 |
NI17_16845 | NI17_16860 | GCA_001660385_01863 | GCA_001660385_01860 | Unannotated protein. | Unannotated protein. | 0.639 |
NI17_16845 | NI17_16865 | GCA_001660385_01863 | GCA_001660385_01859 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.648 |
NI17_16845 | NI17_17560 | GCA_001660385_01863 | GCA_001660385_04207 | Unannotated protein. | Unannotated protein. | 0.859 |
NI17_16845 | acsA | GCA_001660385_01863 | GCA_001660385_01865 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.542 |
NI17_16850 | NI17_16840 | GCA_001660385_01862 | GCA_001660385_01864 | Unannotated protein. | Unannotated protein. | 0.910 |
NI17_16850 | NI17_16845 | GCA_001660385_01862 | GCA_001660385_01863 | Unannotated protein. | Unannotated protein. | 0.924 |
NI17_16850 | NI17_16855 | GCA_001660385_01862 | GCA_001660385_01861 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.930 |
page 1 of 3