STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NI17_12140Unannotated protein. (295 aa)    
Predicted Functional Partners:
NI17_12135
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.994
NI17_12130
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.990
GCA_001660385_00705
Unannotated protein.
 
 0.979
NI17_05420
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.952
NI17_12145
Unannotated protein.
 
 
 
0.920
NI17_01250
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.905
NI17_07240
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.898
NI17_09825
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.881
NI17_07235
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.881
NI17_12150
Unannotated protein.
 
 
  0.874
Your Current Organism:
Thermobifida halotolerans
NCBI taxonomy Id: 483545
Other names: DSM 44931, JCM 16012, KCTC 19123, T. halotolerans, Thermobifida halotolerans Yang et al. 2008, YIM 90462
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.