Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001660385_04605 | lgt | GCA_001660385_04605 | GCA_001660385_03758 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.842 |
GCA_001660385_04605 | lspA | GCA_001660385_04605 | GCA_001660385_03816 | Unannotated protein. | Unannotated protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.830 |
GCA_001660385_04605 | secD | GCA_001660385_04605 | GCA_001660385_00027 | Unannotated protein. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.627 |
NI17_04765 | lgt | GCA_001660385_02251 | GCA_001660385_03758 | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.732 |
NI17_05170 | NI17_22995 | GCA_001660385_04452 | GCA_001660385_02657 | Unannotated protein. | Unannotated protein. | 0.473 |
NI17_05170 | lgt | GCA_001660385_04452 | GCA_001660385_03758 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.770 |
NI17_05170 | trpA | GCA_001660385_04452 | GCA_001660385_03761 | Unannotated protein. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.764 |
NI17_05170 | trpB | GCA_001660385_04452 | GCA_001660385_03762 | Unannotated protein. | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.998 |
NI17_12050 | lgt | GCA_001660385_03759 | GCA_001660385_03758 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.783 |
NI17_12050 | trpA | GCA_001660385_03759 | GCA_001660385_03761 | Unannotated protein. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.412 |
NI17_12050 | trpB | GCA_001660385_03759 | GCA_001660385_03762 | Unannotated protein. | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.412 |
NI17_22995 | NI17_05170 | GCA_001660385_02657 | GCA_001660385_04452 | Unannotated protein. | Unannotated protein. | 0.473 |
NI17_22995 | lgt | GCA_001660385_02657 | GCA_001660385_03758 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.762 |
NI17_22995 | trpA | GCA_001660385_02657 | GCA_001660385_03761 | Unannotated protein. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.751 |
gpsA | lgt | GCA_001660385_00315 | GCA_001660385_03758 | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.721 |
lgt | GCA_001660385_04605 | GCA_001660385_03758 | GCA_001660385_04605 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.842 |
lgt | NI17_04765 | GCA_001660385_03758 | GCA_001660385_02251 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.732 |
lgt | NI17_05170 | GCA_001660385_03758 | GCA_001660385_04452 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.770 |
lgt | NI17_12050 | GCA_001660385_03758 | GCA_001660385_03759 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.783 |
lgt | NI17_22995 | GCA_001660385_03758 | GCA_001660385_02657 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.762 |
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