Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NI17_03470 | NI17_04820 | GCA_001660385_03863 | GCA_001660385_04390 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.923 |
NI17_03470 | NI17_06560 | GCA_001660385_03863 | GCA_001660385_01500 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.991 |
NI17_03470 | NI17_13270 | GCA_001660385_03863 | GCA_001660385_03004 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.942 |
NI17_03470 | NI17_18975 | GCA_001660385_03863 | GCA_001660385_04091 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.862 |
NI17_03470 | NI17_23015 | GCA_001660385_03863 | GCA_001660385_02650 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.899 |
NI17_03470 | pfp | GCA_001660385_03863 | GCA_001660385_03907 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.848 |
NI17_03470 | pgk | GCA_001660385_03863 | GCA_001660385_01477 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Belongs to the phosphoglycerate kinase family. | 0.879 |
NI17_03470 | prs | GCA_001660385_03863 | GCA_001660385_00055 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.859 |
NI17_03470 | tal | GCA_001660385_03863 | GCA_001660385_01499 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.884 |
NI17_03470 | zwf | GCA_001660385_03863 | GCA_001660385_01497 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.904 |
NI17_04820 | NI17_03470 | GCA_001660385_04390 | GCA_001660385_03863 | Unannotated protein. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.923 |
NI17_04820 | NI17_13270 | GCA_001660385_04390 | GCA_001660385_03004 | Unannotated protein. | Unannotated protein. | 0.760 |
NI17_04820 | NI17_18975 | GCA_001660385_04390 | GCA_001660385_04091 | Unannotated protein. | Unannotated protein. | 0.615 |
NI17_04820 | NI17_23015 | GCA_001660385_04390 | GCA_001660385_02650 | Unannotated protein. | Unannotated protein. | 0.775 |
NI17_04820 | tal | GCA_001660385_04390 | GCA_001660385_01499 | Unannotated protein. | Unannotated protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.600 |
NI17_06560 | NI17_03470 | GCA_001660385_01500 | GCA_001660385_03863 | Unannotated protein. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.991 |
NI17_06560 | NI17_13270 | GCA_001660385_01500 | GCA_001660385_03004 | Unannotated protein. | Unannotated protein. | 0.965 |
NI17_06560 | NI17_18975 | GCA_001660385_01500 | GCA_001660385_04091 | Unannotated protein. | Unannotated protein. | 0.619 |
NI17_06560 | pfp | GCA_001660385_01500 | GCA_001660385_03907 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.937 |
NI17_06560 | pgk | GCA_001660385_01500 | GCA_001660385_01477 | Unannotated protein. | Unannotated protein; Belongs to the phosphoglycerate kinase family. | 0.934 |
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