Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NI17_02260 | NI17_03460 | GCA_001660385_04646 | GCA_001660385_04551 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.850 |
NI17_02260 | NI17_05235 | GCA_001660385_04646 | GCA_001660385_01000 | Unannotated protein. | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.927 |
NI17_02260 | NI17_11075 | GCA_001660385_04646 | GCA_001660385_00288 | Unannotated protein. | Unannotated protein. | 0.914 |
NI17_02260 | NI17_11080 | GCA_001660385_04646 | GCA_001660385_00289 | Unannotated protein. | Unannotated protein. | 0.970 |
NI17_02260 | NI17_11095 | GCA_001660385_04646 | GCA_001660385_00292 | Unannotated protein. | Unannotated protein. | 0.854 |
NI17_02260 | NI17_11100 | GCA_001660385_04646 | GCA_001660385_00293 | Unannotated protein. | Unannotated protein. | 0.871 |
NI17_02260 | NI17_12730 | GCA_001660385_04646 | GCA_001660385_02166 | Unannotated protein. | Unannotated protein. | 0.844 |
NI17_02260 | NI17_15825 | GCA_001660385_04646 | GCA_001660385_00218 | Unannotated protein. | Unannotated protein; Belongs to the TPP enzyme family. | 0.901 |
NI17_02260 | NI17_16245 | GCA_001660385_04646 | GCA_001660385_04126 | Unannotated protein. | Unannotated protein. | 0.908 |
NI17_02260 | ilvD | GCA_001660385_04646 | GCA_001660385_02994 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.866 |
NI17_03460 | NI17_02260 | GCA_001660385_04551 | GCA_001660385_04646 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.850 |
NI17_03460 | NI17_05235 | GCA_001660385_04551 | GCA_001660385_01000 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.600 |
NI17_03460 | NI17_11080 | GCA_001660385_04551 | GCA_001660385_00289 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.794 |
NI17_03460 | NI17_11100 | GCA_001660385_04551 | GCA_001660385_00293 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.471 |
NI17_03460 | NI17_12730 | GCA_001660385_04551 | GCA_001660385_02166 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.792 |
NI17_03460 | NI17_16245 | GCA_001660385_04551 | GCA_001660385_04126 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.600 |
NI17_03460 | ilvD | GCA_001660385_04551 | GCA_001660385_02994 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.615 |
NI17_05235 | NI17_02260 | GCA_001660385_01000 | GCA_001660385_04646 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.927 |
NI17_05235 | NI17_03460 | GCA_001660385_01000 | GCA_001660385_04551 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.600 |
NI17_05235 | NI17_11080 | GCA_001660385_01000 | GCA_001660385_00289 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.574 |
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