Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJF06156.1 | AJF06180.1 | GSUB_05675 | GSUB_05860 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
| AJF06156.1 | secY | GSUB_05675 | GSUB_12550 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.622 |
| AJF06180.1 | AJF06156.1 | GSUB_05860 | GSUB_05675 | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
| AJF06180.1 | AJF06181.1 | GSUB_05860 | GSUB_05865 | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.565 |
| AJF06180.1 | AJF07906.1 | GSUB_05860 | GSUB_04575 | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| AJF06180.1 | secY | GSUB_05860 | GSUB_12550 | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.622 |
| AJF06181.1 | AJF06180.1 | GSUB_05865 | GSUB_05860 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.565 |
| AJF07906.1 | AJF06180.1 | GSUB_04575 | GSUB_05860 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| secY | AJF06156.1 | GSUB_12550 | GSUB_05675 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
| secY | AJF06180.1 | GSUB_12550 | GSUB_05860 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |