Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AJF06212.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)    
Predicted Functional Partners:
AJF06211.1
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.993
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 
 0.981
AJF06316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.878
AJF06213.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
  
  
 0.829
AJF05461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.683
AJF06468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
AJF07931.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.646
AJF05299.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
AJF05984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.599
AJF06209.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
Your Current Organism:
Geoalkalibacter subterraneus
NCBI taxonomy Id: 483547
Other names: DSM 23483, G. subterraneus, Geoalkalibacter subterraneus Greene et al. 2009, JCM 15104, KCTC 5626, strain Red1
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