Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJF08000.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa)    
Predicted Functional Partners:
AJF05950.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
AJF08001.1
Modification methylase PaeR7I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.558
AJF06820.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.530
AJF06830.1
Restriction endonuclease PaeR7I; Recognizes the double-stranded sequence CTCGAG and cleaves after C-1; Belongs to the type II restriction enzyme XhoI family.
       0.511
AJF06810.1
Baseplate assembly protein V; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.508
AJF06829.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.472
AJF06828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
AJF06827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
AJF06817.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.429
AJF06823.1
Protein HK97 gp10 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
Your Current Organism:
Geoalkalibacter subterraneus
NCBI taxonomy Id: 483547
Other names: DSM 23483, G. subterraneus, Geoalkalibacter subterraneus Greene et al. 2009, JCM 15104, KCTC 5626, strain Red1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.