STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJF07373.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (931 aa)    
Predicted Functional Partners:
AJF07371.1
N-glycosyltransferase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.960
AJF07372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
AJF07370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.827
AJF07663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
AJF05760.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.527
AJF05350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
AJF07638.1
Addiction module antitoxin RelB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
AJF07677.1
Addiction module antitoxin RelB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
AJF06038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
Your Current Organism:
Geoalkalibacter subterraneus
NCBI taxonomy Id: 483547
Other names: DSM 23483, G. subterraneus, Geoalkalibacter subterraneus Greene et al. 2009, JCM 15104, KCTC 5626, strain Red1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.