STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vanYD-alanyl-D-alanine carboxypeptidase; Product derived from UniProtKB/Swiss-Prot:P37711;Gene name derived from UniProtKB/Swiss-Prot:P37711;EC number derived from UniProtKB/Swiss-Prot:P37711. (292 aa)    
Predicted Functional Partners:
dacB
D-alanyl-D-alanine carboxypeptidase DacB; Product derived from UniProtKB/Swiss-Prot:P35150;Gene name derived from UniProtKB/Swiss-Prot:P35150;EC number derived from UniProtKB/Swiss-Prot:P35150; Belongs to the peptidase S11 family.
     
 0.746
dacA
D-alanyl-D-alanine carboxypeptidase DacA; Product derived from UniProtKB/Swiss-Prot:Q05523;Gene name derived from UniProtKB/Swiss-Prot:Q05523;EC number derived from UniProtKB/Swiss-Prot:Q05523; Belongs to the peptidase S11 family.
     
 0.739
dacF
D-alanyl-D-alanine carboxypeptidase DacF; Product derived from UniProtKB/Swiss-Prot:P38422;Gene name derived from UniProtKB/Swiss-Prot:P38422;EC number derived from UniProtKB/Swiss-Prot:P38422; Belongs to the peptidase S11 family.
     
 0.739
pbpF
Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050;EC number derived from UniProtKB/Trembl:E0I526.
     
 0.730
CDN43685.1
Peptidoglycan glycosyltransferase; Product derived from UniProtKB/Trembl:E0I3Q0;EC number derived from UniProtKB/Trembl:E0I3Q0.
     
 0.730
pbpF-2
Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050.
     
 0.730
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.695
vanS-2
Sensor protein VanS; Product derived from UniProtKB/Swiss-Prot:Q06240;Gene name derived from UniProtKB/Swiss-Prot:Q06240;EC number derived from UniProtKB/Swiss-Prot:Q06240.
 
     0.584
ykfA
Probable murein peptide carboxypeptidase; Product derived from UniProtKB/Swiss-Prot:O34851;Gene name derived from UniProtKB/Swiss-Prot:O34851;EC number derived from UniProtKB/Swiss-Prot:O34851.
     
 0.580
vanTG
Amino-acid racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
   
 0.546
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.