STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfnBPutative HAD-hydrolase YfnB; Product derived from UniProtKB/Swiss-Prot:O06480;Gene name derived from UniProtKB/Swiss-Prot:O06480;EC number derived from UniProtKB/Swiss-Prot:O06480. (233 aa)    
Predicted Functional Partners:
ywdH
Probable aldehyde dehydrogenase YwdH; Product derived from UniProtKB/Swiss-Prot:P39616;Gene name derived from UniProtKB/Swiss-Prot:P39616;EC number derived from UniProtKB/Swiss-Prot:P39616; Belongs to the aldehyde dehydrogenase family.
  
  
  0.913
CDN41539.1
Hypothetical membrane protein; Product derived from UniProtKB/Trembl:A8FDX8.
       0.857
yeiL
Regulatory protein YeiL; Product derived from UniProtKB/Swiss-Prot:P0A9E9;Gene name derived from UniProtKB/Swiss-Prot:P0A9E9.
       0.806
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.799
recF
Hypothetical protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
       0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.764
guaA
Putative GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.714
CDN41536.1
Hypothetical protein.
       0.584
yjgM
Uncharacterized N-acetyltransferase YjgM; Product derived from UniProtKB/Swiss-Prot:Q08021;Gene name derived from UniProtKB/Swiss-Prot:Q08021;EC number derived from UniProtKB/Swiss-Prot:Q08021.
 
  
  0.584
CDN43321.1
Predicted hydrolase of HD superfamily; Product derived from UniProtKB/Trembl:E0RLZ7.
  
  
  0.583
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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