STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN41837.1Putative uncharacterized protein; Product derived from UniProtKB/Trembl:F3MJR2. (298 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
       0.706
CDN44159.1
Transcriptional regulator; Product derived from UniProtKB/Trembl:H3SDH8.
  
     0.565
spo0F
Sporulation initiation phosphotransferase F; Product derived from UniProtKB/Swiss-Prot:P52942;Gene name derived from UniProtKB/Swiss-Prot:P52942;EC number derived from UniProtKB/Swiss-Prot:P52942.
    
  0.507
CDN42250.1
Glycosyl transferase 2 family protein; Product derived from UniProtKB/Trembl:K4ZNE6.
    
  0.492
CDN41838.1
Hypothetical protein.
       0.466
CDN42339.1
Transcriptional regulator, TetR family; Product derived from UniProtKB/Trembl:D6TVG6.
  
     0.465
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.430
CDN42845.1
Hypothetical protein; Belongs to the NDK family.
    
  0.428
CDN44994.1
Putative uncharacterized protein; Product derived from UniProtKB/Trembl:C6J2F7.
  
     0.422
CDN44168.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.