STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN42078.1Prophage portal protein, SPP1 family; Product derived from UniProtKB/Trembl:M8DEF5. (519 aa)    
Predicted Functional Partners:
CDN42077.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:M5PFA8.
  
    0.805
CDN42080.1
Rhs family protein; Product derived from UniProtKB/Trembl:M8DM68.
       0.671
CDN42079.1
Hypothetical protein.
       0.478
CDN42081.1
Hypothetical protein.
       0.478
CDN42082.1
Hypothetical protein.
       0.478
CDN42083.1
Hypothetical protein.
       0.478
CDN42084.1
Scaffold protein; Product derived from UniProtKB/Trembl:M8DMM0.
       0.476
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.