STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN42336.1Uncharacterized protein; Product derived from UniProtKB/Trembl:L0E9D1. (194 aa)    
Predicted Functional Partners:
CDN42335.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:R9L450.
 
     0.863
CDN42337.1
Hypothetical protein.
       0.857
CDN41598.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EFD4.
  
     0.714
CDN42390.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:C6D432.
  
     0.709
CDN43495.1
Hypothetical protein; Belongs to the glycosyl hydrolase 26 family.
  
     0.663
CDN43037.1
Hypothetical protein.
  
     0.662
CDN44155.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:C6CSK4.
  
     0.639
CDN42903.1
Hypothetical protein.
  
     0.612
CDN45770.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:E0I874.
  
     0.612
CDN45031.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.