STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN42711.1Transcriptional regulator, AraC family; Product derived from UniProtKB/Trembl:G4H8U5. (275 aa)    
Predicted Functional Partners:
adaA
Bifunctional transcriptional activator/DNA repair enzyme AdaA; Product derived from UniProtKB/Swiss-Prot:P19219;Gene name derived from UniProtKB/Swiss-Prot:P19219;EC number derived from UniProtKB/Swiss-Prot:P19219.
 
     0.730
CDN44567.1
Transcriptional regulator, AraC family; Product derived from UniProtKB/Trembl:E0ICT2.
 
0.664
CDN44944.1
AraC family transcriptional regulator; Product derived from UniProtKB/Trembl:C6IZN9.
 
0.664
CDN42713.1
Phytanoyl-CoA dioxygenase; Product derived from UniProtKB/Trembl:H6NBX5.
 
  
  0.660
CDN45571.1
GAF sensor hybrid histidine kinase; Product derived from UniProtKB/Trembl:F8FLJ0.
  
 
 0.657
CDN42536.1
Hypothetical protein.
 
0.616
CDN42712.1
Hypothetical protein.
    
  0.606
yqhC
Uncharacterized HTH-type transcriptional regulator YqhC; Product derived from UniProtKB/Swiss-Prot:Q46855;Gene name derived from UniProtKB/Swiss-Prot:Q46855.
  
   0.604
flgG
Flagellar basal-body rod protein FlgG; Product derived from UniProtKB/Swiss-Prot:P23446;Gene name derived from UniProtKB/Swiss-Prot:P23446.
    
   0.591
flhO
Flagellar hook-basal body complex protein FlhO; Product derived from UniProtKB/Swiss-Prot:P39752;Gene name derived from UniProtKB/Swiss-Prot:P39752; Belongs to the flagella basal body rod proteins family.
    
   0.591
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.