STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yprBUncharacterized protein YprB; Product derived from UniProtKB/Swiss-Prot:P50837;Gene name derived from UniProtKB/Swiss-Prot:P50837. (448 aa)    
Predicted Functional Partners:
yprA
Uncharacterized ATP-dependent helicase YprA; Product derived from UniProtKB/Swiss-Prot:P50830;Gene name derived from UniProtKB/Swiss-Prot:P50830;EC number derived from UniProtKB/Swiss-Prot:P50830.
 
  
 0.940
ypuF
Uncharacterized protein YpuF; Product derived from UniProtKB/Swiss-Prot:P17617;Gene name derived from UniProtKB/Swiss-Prot:P17617.
  
     0.435
CDN45458.1
Hypothetical protein.
 
     0.432
CDN41830.1
Von Willebrand factor type A; Product derived from UniProtKB/Trembl:E0I6I9.
  
     0.402
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.