STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN43274.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
CDN42231.1
Hypothetical protein.
  
     0.697
CDN44741.1
Hypothetical protein.
  
     0.695
CDN44285.1
Hypothetical protein.
  
     0.574
CDN44601.1
Hypothetical protein.
  
     0.454
CDN44154.1
Hypothetical protein.
  
     0.442
nos
Nitric oxide synthase oxygenase; Product derived from UniProtKB/Swiss-Prot:O34453;Gene name derived from UniProtKB/Swiss-Prot:O34453;EC number derived from UniProtKB/Swiss-Prot:O34453.
  
     0.422
CDN43273.1
Carbohydrate binding module (Family 6); Product derived from UniProtKB/Trembl:F5LBN1.
       0.415
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.