STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN43327.1Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:C6CSZ2. (582 aa)    
Predicted Functional Partners:
ytcP-5
Probable ABC transporter permease protein YtcP; Product derived from UniProtKB/Swiss-Prot:P53561;Gene name derived from UniProtKB/Swiss-Prot:P53561.
 
  0.914
CDN45357.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:C6CVD0.
  
  
  0.885
CDN43416.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:C6D7X3.
  
  
  0.883
ytcP-3
Probable ABC transporter permease protein YtcP; Product derived from UniProtKB/Swiss-Prot:P53561;Gene name derived from UniProtKB/Swiss-Prot:P53561.
  
  0.878
ytcP-9
Probable ABC transporter permease protein YtcP; Product derived from UniProtKB/Swiss-Prot:P53561;Gene name derived from UniProtKB/Swiss-Prot:P53561.
  
  0.854
lplB
Protein LplB; Product derived from UniProtKB/Swiss-Prot:P39128;Gene name derived from UniProtKB/Swiss-Prot:P39128.
 
 
  0.841
CDN42268.1
Hypothetical protein.
  
  0.839
yteP-5
Uncharacterized multiple-sugar transport system permease YteP; Product derived from UniProtKB/Swiss-Prot:C0SPB3;Gene name derived from UniProtKB/Swiss-Prot:C0SPB3.
 
 
  0.827
ytcP-8
Probable ABC transporter permease protein YtcP; Product derived from UniProtKB/Swiss-Prot:P53561;Gene name derived from UniProtKB/Swiss-Prot:P53561.
  
  0.825
ytcP-7
Probable ABC transporter permease protein YtcP; Product derived from UniProtKB/Swiss-Prot:P53561;Gene name derived from UniProtKB/Swiss-Prot:P53561.
  
  0.822
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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