STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilTTwitching mobility protein; Product derived from UniProtKB/Swiss-Prot:P24559;Gene name derived from UniProtKB/Swiss-Prot:P24559. (349 aa)    
Predicted Functional Partners:
pilC
Type 4 fimbrial assembly protein PilC; Product derived from UniProtKB/Swiss-Prot:P22609;Gene name derived from UniProtKB/Swiss-Prot:P22609.
 
  
 0.974
epsE
Type II secretion system protein E; Product derived from UniProtKB/Swiss-Prot:P37093;Gene name derived from UniProtKB/Swiss-Prot:P37093.
 
 
0.927
CDN43429.1
Hypothetical protein.
 
     0.815
CDN45062.1
Fimbrial assembly family protein; Product derived from UniProtKB/Trembl:C6CY61.
 
   
 0.782
CDN45571.1
GAF sensor hybrid histidine kinase; Product derived from UniProtKB/Trembl:F8FLJ0.
  
  
 0.715
CDN45061.1
Hypothetical protein.
 
   
 0.702
CDN45232.1
DNA internalization competence protein ComEC/Rec2-like protein; Product derived from UniProtKB/Trembl:F3M630.
     
 0.492
CDN45063.1
Hypothetical protein.
  
  
 0.412
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.