STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN43519.1Hypothetical conserved protein; Product derived from UniProtKB/Trembl:Q8ETS9. (683 aa)    
Predicted Functional Partners:
parC
DNA topoisomerase 4 subunit A; Product derived from UniProtKB/Swiss-Prot:Q45066;Gene name derived from UniProtKB/Swiss-Prot:Q45066;EC number derived from UniProtKB/Swiss-Prot:Q45066.
  
 0.962
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
 0.962
CDN43518.1
Hypothetical protein.
 
   
 0.948
CDN43520.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:R9MNE0; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
     0.897
CDN42960.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:R8CTP9.
 
 
 
 0.835
CDN44226.1
Hypothetical protein.
 
  
 0.814
yisX
Uncharacterized protein YisX; Product derived from UniProtKB/Swiss-Prot:O06733;Gene name derived from UniProtKB/Swiss-Prot:O06733.
    
 
 0.784
CDN44227.1
Hypothetical protein.
 
   
 0.779
CDN42959.1
Hypothetical protein.
 
     0.770
CDN43517.1
Hypothetical protein.
     
 0.664
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.